BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036C05SP1|AL430196
(338 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1719 194 1e-49
>3x_Contig1719
Length = 15804
Score = 194 bits (94), Expect = 1e-49
Identities = 119/132 (90%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 171 gaaaaacaacaaatacaacctctttgtamaagtgactsgratcgagcrrrctggatcatt 230
|||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||
Sbjct: 9562 gaaaaacaacaaatacaacctctttgtacaagtgactgggatcgagcgggctggatcatt 9503
Query: 231 aackaataaaaaggaaaacccatcgatcaaattctmcttttccmcgaacttacccacatt 290
||| |||||||||||||||||||||||||||||| || | || ||||||||||||||||
Sbjct: 9502 aacgaataaaaaggaaaacccatcgatcaaattcgactgtaccacgaacttacccacatt 9443
Query: 291 ccgctaaaccta 302
||| ||||||||
Sbjct: 9442 ccg-taaaccta 9432
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.719 1.35
Gapped
Lambda K H
1.43 0.719 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1923
Number of Sequences: 1807
Number of extensions: 1923
Number of successful extensions: 160
Number of sequences better than 1.0e-20: 1
length of query: 338
length of database: 10,358,551
effective HSP length: 15
effective length of query: 323
effective length of database: 10,331,446
effective search space: 3337057058
effective search space used: 3337057058
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.9 bits)
S1: 11 (23.2 bits)
S2: 48 (99.5 bits)